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Microarrays
AGRF provides Bioinformatics services for the following Microarray Platforms:
- Affymetrix
- illumina
- Agilent
The data analysis workflow for differential gene expression analysis is as follows:
The AGRF uses the following tools for differential gene expression analysis:
Clients are provided with Spreadsheets containing 5 different sheets including:
- normalised values of all the probes / genes across all the chips
- differentially expressed genes along with Fold-change and / or P-values and annotations
- molecular function statistics of differentially expressed genes
- cellular component statistics of differentially expressed genes
- biological process statistics of differentially expressed genes
- K-means / hierarchical clustering









